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Abstract Background and AimsQuantifying niche similarity among closely related species offers myriad insights into evolutionary history and ecology. In this study, our aim was to explore the interplay of geographical and niche space for rare, endemic plant species and to determine whether endemic habitats were environmentally similar or unique. MethodsWe characterized the niche of all Leavenworthia species, a genus of rare plants endemic to rocky glades in the eastern USA, using WorldClim data, surface geology, elevation and slope. We calculated the area of range overlap and estimated niche similarity between pairs of species in their total occupied niche space and the subset of niche space shared by both species. We used linear discriminant analyses to determine which niche dimensions differed the most between species. We used niche dimensions with consistently high discriminatory power to perform a random forest classification analysis and principal component analysis. Using a linear model, we related geographical distance to distance in niche space. Key ResultsMost species comparisons concluded that species niches had diverged, with niche similarity increasing linearly with range overlap. Temperature variation, precipitation amount and seasonality, and surface geology were the most divergent niche dimensions among all species comparisons. Geographical distance explained 42 % of the variation in niche space distance. Sites that were closer in niche space than expected were oriented east–west owing to the strong correlation between latitude and scores on the first principal component. ConclusionsDespite being endemic seemingly to very similar habitat, niche similarity is low among Leavenworthia species. Low niche similarity, combined with low geographical overlap, suggests that this lineage of rare plants potentially diversified in isolation but across a very small geographical area. The correlation between geographical space and niche space has received considerable attention, but our results suggest that geographical distance is a weak predictor of distance in niche space. 

Abstract PremiseUnderstanding relationships among grass traits, fire, and herbivores may help improve conservation strategies for savannas that are threatened by novel disturbance regimes. Emerging theory, developed in Africa, emphasizes that functional traits of savanna grasses reflect the distinct ways that fire and grazers consume biomass. Specifically, functional trade‐offs related to flammability and palatability predict that highly flammable grass species will be unpalatable, while highly palatable species will impede fire. MethodsWe quantified six culm and leaf traits of 337 native grasses of Texas—a historical savanna region that has been transformed by fire exclusion, megafaunal extinctions, and domestic livestock. ResultsMultivariate analyses of traits revealed three functional strategies. “Grazer grasses” (N = 50) had culms that were short, narrow, and horizontal, and leaves with high width to length (W:L) and low C to N ratios (C:N)—trait values that attract grazers and avoid fire. “Fire grasses” (N = 104) had culms that were tall, thick, and upright, and leaves that were thick, with low W:L, and high C:N—trait values that promote fire and discourage grazers. “Generalist tolerators” and “generalist avoiders” (N = 183) had trait values that were intermediate to the other groups. ConclusionsOur findings confirm that the flammability–palatability trade‐offs that operate in Africa also explain correlated suites of traits in Texas grasses and highlights that the grass flora of Texas bears the signature of Pleistocene megafauna and the influence of fires that predate human arrival. We suggest that grass functional classifications based on fire and grazer traits can improve prescribed fire and livestock management of savannas of Texas and globally. 

We used nuclear genomic data and statistical models to evaluate the ecological and evolutionary processes shaping spatial variation in species richness inCalochortus(Liliaceae, 74 spp.).Calochortusoccupies diverse habitats in the western United States and Mexico and has a center of diversity in the California Floristic Province, marked by multiple orogenies, winter rainfall, and highly divergent climates and substrates (including serpentine). We used sequences of 294 low-copy nuclear loci to produce a time-calibrated phylogeny, estimate historical biogeography, and test hypotheses regarding drivers of present-day spatial patterns in species number. Speciation and species coexistence require reproductive isolation and ecological divergence, so we examined the roles of chromosome number, environmental heterogeneity, and migration in shaping local species richness. Six major clades—inhabiting different geographic/climatic areas, and often marked by different base chromosome numbers (n = 6 to 10)—began diverging from each other ~10.3 Mya. As predicted, local species number increased significantly with local heterogeneity in chromosome number, elevation, soil characteristics, and serpentine presence. Species richness is greatest in the Transverse/Peninsular Ranges where clades with different chromosome numbers overlap, topographic complexity provides diverse conditions over short distances, and several physiographic provinces meet allowing immigration by several clades. Recently diverged sister-species pairs generally have peri-patric distributions, and maximum geographic overlap between species increases over the first million years since divergence, suggesting that chromosomal evolution, genetic divergence leading to gametic isolation or hybrid inviability/sterility, and/or ecological divergence over small spatial scales may permit species co-occurrence. 

Abstract Generalization is difficult to quantify, and many classifications exist. A beta diversity framework can be used to establish a numeric measure of generalist tendencies that jointly describes many important features of species interactions, namely spatiotemporal heterogeneity. This framework is promising for studying generalized symbiotic relationships of any form.We formulated a novel index, turnover importance (T).Tdescribes spatiotemporal heterogeneity in interactor assemblages, an inherent feature of generalist relationships that is not captured by available metrics. We simulated the behaviour ofTrelative to other available metrics, calculatedTfor native North American orchid‐insect relationships, and tested correlations betweenTand eco‐geographic variables. We performed case studies to demonstrate applications ofTfor conservation and eco‐evolutionary studies.Tbehaves predictably across simulations, and dynamically interacts with site number, gamma diversity, and species range sizes.Tis moderately sensitive to sampling depth. Orchids with higherTscores occupy larger ranges and broader climatic niches.Alternative interactor‐specific measures of generalism are best employed for local‐level community networks over short timespans. While these interactor metrics can assess use versus availability in local communities,Tcan be used to measure spatiotemporal patterns of variation in interactor assemblages across a focal species' range. This study provides a roadmap for future work focused on better understanding the patterns and consequences of generalized relationships. 

Abstract Winter annuals comprise a large fraction of warm-desert plant species, but the drivers of their diversity are little understood. One factor that has generally been overlooked is the lack of obvious means of long-distance seed dispersal in many desert-annual lineages, which could lead to genetic differentiation at small spatial scales and, ultimately, to speciation and narrow endemism. If our gene-flow hypothesis is correct, individual winter-annual species should have populations with genetic spatial structures implying short distances of gene flow. To test this idea, we sampled six populations of Eschscholzia parishii (Papaveraceae) in three pairs of watersheds within a 28-km radius in southern California. We quantified genetic diversity and structure and inferred the distance of gene flow in these populations using single nucleotide polymorphisms derived from genotyping-by-sequencing. Estimated distances of gene flow were quite small (σ = 10.4–14.9 m), with strong genetic structure observed within and between populations. Kinship declined steeply with ln distance (r2 = 0.85). Petal size and shape differed significantly between the northernmost and southernmost populations. These findings support the hypothesis that the high diversity of warm-desert winter annuals might result, in part, from genetic differentiation within species at small spatial scales driven by poor seed dispersal. 

PremiseWe tested 25 classic and novel hypotheses regarding trait–origin, trait–trait, and trait–environment relationships to account for flora‐wide variation in life history, habit, and especially reproductive traits using a plastid DNA phylogeny of most native (96.6%, or 1494/1547 species) and introduced (87.5%, or 690/789 species) angiosperms in Wisconsin, USA. MethodsWe assembled data on life history, habit, flowering, dispersal, mating system, and occurrence across open/closed/mixed habitats across species in the state phylogeny. We used phylogenetically structured analyses to assess the strength and statistical significance of associations predicted by our models. ResultsIntroduced species are more likely to be annual herbs, occupy open habitats, have large, visually conspicuous, hermaphroditic flowers, and bear passively dispersed seeds. Among native species, hermaphroditism is associated with larger, more conspicuous flowers; monoecy is associated with small, inconspicuous flowers and passive seed dispersal; and dioecy is associated with small, inconspicuous flowers and fleshy fruits. Larger flowers with more conspicuous colors are more common in open habitats, and in understory species flowering under open (spring) canopies; fleshy fruits are more common in closed habitats. Wind pollination may help favor dioecy in open habitats. ConclusionsThese findings support predictions regarding how breeding systems depend on flower size, flower color, and fruit type, and how those traits depend on habitat. This study is the first to combine flora‐wide phylogenies with complete trait databases and phylogenetically structured analyses to provide powerful tests of evolutionary hypotheses about reproductive traits and their variation with geographic source, each other, and environmental conditions. 

Summary Poales are one of the most species‐rich, ecologically and economically important orders of plants and often characterise open habitats, enabled by unique suites of traits. We test six hypotheses regarding the evolution and assembly of Poales in open and closed habitats throughout the world, and examine whether diversification patterns demonstrate parallel evolution.We sampled 42% of Poales species and obtained taxonomic and biogeographic data from the World Checklist of Vascular Plants database, which was combined with open/closed habitat data scored by taxonomic experts. A dated supertree of Poales was constructed. We integrated spatial phylogenetics with regionalisation analyses, historical biogeography and ancestral state estimations.Diversification in Poales and assembly of open and closed habitats result from dynamic evolutionary processes that vary across lineages, time and space, most prominently in tropical and southern latitudes. Our results reveal parallel and recurrent patterns of habitat and trait transitions in the species‐rich families Poaceae and Cyperaceae. Smaller families display unique and often divergent evolutionary trajectories.The Poales have achieved global dominance via parallel evolution in open habitats, with notable, spatially and phylogenetically restricted divergences into strictly closed habitats.